Publications

Papers published in Journals

  • 2023
  • 2022

2023

Anchal Purbey, Apoorva Nambiar, Dripta Roy Choudhury, Thirumal Vennam, Khushboo Balani, Satish Balram Agnihotri, "Stillbirth rates and its spatial patterns in India: An exploration of HMIS data", The Lancet Regional Health - Southeast Asia, Vol 9 (2023), https://doi.org/10.1016/j.lansea.2022.100116

Piyush Singh Pasi, Karthikeya Battepati, Preethi Jyothi, Ganesh Ramakrishnan, Tanmay Mahapatra, Manoj Singh, “Temporally Aligning Long Audio Interviews with Questions: A Case Study in Multimodal Data Integration”, In Proceedings of The 32nd International Joint Conference on Artificial Intelligence, (IJCAI 2023) https://ijcai-23.org/special-track-on-ai-for-good/

Susweta Das , Ria Paul , Soumyajit Sarkar , Makrand Rakshe , Prasanna Gandhi, and Hari M Varma, “A microfluidic based cerebral perfusion phantom for laser speckle imaging in small animals, Oral Presentation, European Conferences on Biomedical Optics 2023, 25-29 June, 2023

Hari M varma “Bio-imaging using noise: Application of laser speckles for deep tissue blood flow imaging” BRICS workshop on Biophotonics, 2023 (online among different BRICS countries)

Ria Paul, Soumyajit Sarkar, Shruti D. Marathe, Murali K, Susweta Das, Nixon M. Abraham, and Hari M Varma, "Functional imaging of olfactory bulb and somatosensory cortex in mice using small-animal blood flow imaging platform" Oral Presentation "Dynamics and Fluctuations in Biomedical Photonics XX, SPIE Photonic West, San Francisco, 28th 2 January 2023.

Prof Sanjeeva Srivastava et al., Advances in Drug Discovery based on Genomics, Proteomics and Bioinformatics in Malaria, Current Topics in Medicinal Chemistry, Mar, 2023

Prof Sanjeeva Srivastava et al., Identification of potential biomarkers in glioblastoma through omics technologies and big data analysis (Book Chapter), New Insights Into Glioblastoma Diagnosis, Therapeutics and Theranostics, May, 2023

Prof Sanjeeva Srivastava et al., Colon Adenocarcinoma Quantitative Proteomics Reveals Dysregulation in Key Cancer Signaling Pathways and a Candidate Protein Marker Panel, OMICS: A Journal of Integrative Biology, Feb, 2023

Prof Sanjeeva Srivastava et al., Integrative Proteomic and Pharmacological Analysis of Colon Cancer Reveals the Classical Lipogenic Pathway with Prognostic and Therapeutic Opportunities, Journal of proteome research, Feb, 2023

Prof Sanjeeva Srivastava et al., Humoral Immune Response Profile of COVID-19 Reveals Severity and Variant-Specific Epitopes: Lessons from SARSCoV- 2 Peptide Microarray, MDPI viruses, Jan, 2023

Prof Sanjeeva Srivastava et al., Multiomics data analysis workflow to assess severity in longitudinal plasma samples of COVID-19 patients, Data in Brief, Feb, 2023

Prof Sanjeeva Srivastava et al., Metaproteomic analysis of nasopharyngeal swab samples to identify microbial peptides and potential co-infection status in COVID-19 patients (pre-print), bioRxiv, Jan, 2023

2022

Tandon, T., Piccolo, M., Ledermann, K. et al., “Relationship between behavioral and mood responses to monetary rewards in a sample of Indian students with and without reported pain”, Sci Rep 12, 20242 (2022), https://doi.org/10.1038/s41598-022-24821-2

Suraj Kothawade, Akshit Shrivastava, Venkat Iyer, Ganesh Ramakrishnan, Rishabh Iyer, “DIAGNOSE: Avoiding Out-of-distribution Data using Submodular Information Measures”, In Proceedings of the First International Workshop, MILLanD 2022, Held in Conjunction with MICCAI 2022, Singapore, September 22, 2022, https://link.springer.com/book/9783031167591

Suraj Kothawade, Atharv Savarkar, Venkat Iyer, Ganesh Ramakrishnan, Rishabh Iyer, “CLINICAL: Targeted Active Learning for Imbalanced Medical Image Classification”, In Proceedings of the First International Workshop, MILLanD 2022, Held in Conjunction with MICCAI 2022, Singapore, September 22, 2022, https://link.springer.com/book/9783031167591

Murali, K., and Hari M. Varma. "Laser speckle simulation tool based on stochastic differential equations for bio imaging applications." Biomedical Optics Express 13.12 (2022): 6745-6762.

Paul, Ria, K. Murali, and Hari M. Varma. "High-density diffuse correlation tomography with enhanced depth localization and minimal surface artefacts." Biomedical Optics Express 13.11 (2022): 6081-6099.

Paul, Ria, K. Murali, Sumana Chetia, and Hari M. Varma. "A simple algorithm for diffuse optical tomography (DOT) without matrix inversion." Biomed. Phys. Eng. Express 8 (2022) 045001

Paul, Ria, Soumyajit Sarkar, K. Murali, and Hari M. Varma “A modular design approach to build a portable small-animal cerebral blood flow imaging platform” fNIRS 2022 conference, Boston, US

Paul, R., Murali, K, and Hari M Varma, A Spatially Weighted Filter Design for High Density Diffuse Correlation Tomography : Biophotonics Conference : Biomedical Optics 24-27 April, 2022 Fort Lauderdale, Florida, United States

Murali, K, and Hari M Varma. , A stochastic differential equation based algorithm to simulate laser speckles for deep-tissue blood flow imaging applications: Biophotonics Conference: Biomedical Optics 24-27 April, 2022 Fort Lauderdale, Florida, United States

Prof Sanjeeva Srivastava et al., Insights on Proteomics-Driven Body Fluid-Based Biomarkers of Cervical Cancer, MDPI proteomes, Mar, 2022

Prof Sanjeeva Srivastava et al., Clinical Proteomics for Meningioma: An Integrated Workflow for Quantitative Proteomics and Biomarker Validation in Formalin-Fixed Paraffin-Embedded Tissue Samples, OMICS: A Journal of Integrative Biology, Sep, 2022

Prof Sanjeeva Srivastava et al., A protein microarray-based serum proteomic investigation reveals distinct autoantibody signature in colorectal cance, Proteomics Cliical Applications, Nov, 2022

Prof Sanjeeva Srivastava et al., The First Pituitary Proteome Landscape From Matched Anterior and Posterior Lobes for a Better Understanding of the Pituitary Gland, Molecular and Celular Proteomics, Dec, 2022

Prof Sanjeeva Srivastava et al., Deep Phosphoproteome Landscape of Interhemispheric Functionality of Neuroanatomical Regions of the Human Brain, Journal of Proteome Research, Nov, 2022

Prof Sanjeeva Srivastava et al., Evaluation of autoantibody signatures in pituitary adenoma patients using human proteome arrays, Proteomics Clinical Applications, Aug, 2022

Prof Sanjeeva Srivastava et al., Metabolomics Profiling of Pituitary Adenomas by Raman Spectroscopy, Attenuated Total Reflection-Fourier Transform Infrared Spectroscopy, and Mass Spectrometry of Serum Samples, Analytical Chemistry, Aug, 2022

Prof Sanjeeva Srivastava et al., Semen Proteomics of COVID-19 Convalescent Men Reveals Disruption of Key Biological Pathways Relevant to Male Reproductive Function, ACS Omega, Mar, 2022